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1998
R. A. Lutz, Desbruyeres, D., Shank, T. M., and Vrijenhoek, R. C., A deep-sea hydrothermal vent community dominated by Stauromedusae, Deep-Sea Research. Part II: Topical Studies in Oceanography, vol. 45, pp. 329–334, 1998.
M. B. Black, Trivedi, A., A Y Maas, P., Lutz, R. A., and Vrijenhoek, R. C., Population genetics and biogeography of vestimentiferan tube worms, Deep-Sea Research. Part II: Topical Studies in Oceanography, vol. 45, pp. 365–382, 1998.
2003
C. T. S. Little and Vrijenhoek, R. C., Are hydrothermal vent animals living fossils?, Trends in Ecology and Evolution, vol. 18, pp. 582–588, 2003.
C. L. Van Dover, Aharon, P., Bernhard, J. M., Caylor, E., Doerries, M. B., Flickinger, W., Gilhooly, W., Goffredi, S. K., Knick, K. E., Macko, S. A., Rapoport, S., Raulfs, E. C., Ruppel, C., Salerno, J. L., Seitz, R. D., Gupta, B. K. Sen, Shank, T. M., Turnipseed, M., and Vrijenhoek, R. C., Blake Ridge methane seeps: Characterization of a soft-sediment, chemosynthetically based ecosystem, Deep-Sea Research. Part I: Oceanographic Research Papers, vol. 50, pp. 281–300, 2003.
L. A. Hurtado, Mateos, M., Lutz, R. A., and Vrijenhoek, R. C., Coupling of bacterial endosymbiont and host mitochondrial genomes in the hydrothermal vent clam Calyptogena magnifica, Applied and Environmental Microbiology, vol. 69, pp. 2058–2064, 2003.
Y. - J. Won, Hallam, S. J., O'Mullan, G. D., and Vrijenhoek, R. C., Cytonuclear disequilibrium in a hybrid zone involving deep-sea hydrothermal vent mussels of the genus Bathymodiolus, Molecular Ecology, vol. 12, pp. 3185–3190, 2003.
Y. - J. Won, Young, C. R., Lutz, R. A., and Vrijenhoek, R. C., Dispersal barriers and isolation among deep-sea mussel populations (Mytilidae: Bathymodiolus) from eastern Pacific hydrothermal vents, Molecular Ecology, vol. 12, pp. 169–184, 2003.
Y. - J. Won, Hallam, S. J., O'Mullan, G. D., Pan, I. L., Buck, K. R., and Vrijenhoek, R. C., Environmental acquisition of thiotrophic endosymbionts by deep-sea mussels of the genus Bathymodiolus, Applied and Environmental Microbiology, vol. 69, pp. 6785–6792, 2003.
S. K. Goffredi, Hurtado, L. A., Hallam, S. J., and Vrijenhoek, R. C., Evolutionary relationships of deep-sea vent and cold seep clams (Mollusca: Vesicomyidae) of the "pacifica/lepta" species complex, Marine Biology, vol. 142, pp. 311–320, 2003.

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