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, “Archaea, Origin of”, in Encyclopedia of biodiversity, vol. 1, San Diego, Calif.: Academic Press, 2001, pp. 219–230.
, “AFLP analyses of genomic DNA reveal no differentiation between two phenotypes of the vestimentiferan tubeworm Ridgeia piscesae”, Cahiers de Biologie Marine, vol. 43, pp. 363–366, 2002.
, “Age dependent porosity of young upper oceanic crust: Insights from seafloor gravity studies of recent volcanic eruptions”, Geophysical Research Letters, vol. 29, p. 1076, 2002.
, “Ambient light emission from hydrothermal vents on the Mid-Atlantic Ridge”, Geophysical Research Letters, vol. 29, p. Article no 1744, 2002.
, “Aberrant youth: Chemical and isotopic constraints on the young off-axis lavas of the East Pacific Rise, 9 degrees -10 degrees N”, Geochemistry, Geophysics, Geosystems, vol. 4, p. Article no. 8621, 2003.
, “Aqueous volatiles in hydrothermal fluids from the Main Endeavour Field, northern Juan de Fuca ridge: Temporal variability following earthquake activity”, Earth and Planetary Science Letters, vol. 216, pp. 575–590, 2003.
, “Are hydrothermal vent animals living fossils?”, Trends in Ecology and Evolution, vol. 18, pp. 582–588, 2003.
, “Activation of diatomic and triatomic molecules for the synthesis of organic compounds: Metal catalysis at the subseafloor biosphere”, in Subseafloor Biosphere at Mid-Ocean Ridges, Washington, D.C.: American Geophyical Union, 2004, pp. 191–197.
, “Alvin's pilots a tight-knit group with the 'right stuff' to guide a submersible on the seafloor”, Oceanus, vol. 44, pp. 26–31, 2005.
, “Archaeal diversity in ODP legacy borehole 892b and associated seawater and sediments of the Cascadia Margin”, FEMS Microbiology Ecology, vol. 54, pp. 167–177, 2005.
, “ABE the autonomous benthic explorer”, Oceanus, vol. 45, pp. 28–30, 2006.
, “Adaptive sampling in autonomous marine sensor networks”, Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution, Cambridge, MA and Woods Hole, MA, 2006.
“Alvin's last ride: Sentry's first”, Oceanus, vol. 45, p. 17, 2006.
, “Advances in High Resolution Imaging from Underwater Vehicles”, in Robotics Research: Results of the 12th International Symposium ISRR, Berlin: Springer, 2007, pp. 430–448.
, “Alvin explores the deep northern Gulf of Mexico Slope”, EOS, Transactions, American Geophysical Union, vol. 88, pp. 341–342, 2007.
, “Amphi-Atlantic cold-seep Bathymodiolus species complexes across the equatorial belt”, Deep-Sea Research. Part I: Oceanographic Research Papers, vol. 54, pp. 1890–1911, 2007.
, “Amphipoda (Crustacea; Peracarida) from the hydrothermal vent system of the Juan De Fuca Ridge, Escabana trough and Gorda ridge, Northeast Pacific. Part I. Lysianassidae and sebidae”, Zootaxa, vol. 1445, pp. 1–26, 2007.
, “Ancient DNA techniques : applications for deep-water corals”, Bulletin of Marine Science, vol. 81, pp. 351–359, 2007.
, “An anthropologist underwater: Immersive soundscapes, submarine cyborgs, and transductive ethnography”, American Ethnologist, vol. 34, pp. 621–641, 2007.
, “Autonomous and remotely operated vehicle technology for hydrothermal vent discovery, exploration, and sampling”, Oceanography, vol. 20, pp. 152–161, 2007.
, “Absence of cospeciation between deep-sea mytilids and their thiotrophic endosymbionts”, Journal of Shellfish Research, vol. 27, pp. 129–138, 2008.
, “Abundances of hyperthermophilic autotrophic Fe(III) oxide reducers and heterotrophs in deep-sea hydrothermal sulfide chimneys of the northeastern Pacific Ocean.”, Applied and Environmental Microbiology, vol. 75, pp. 242–245, 2009.
, “Adaptation of chemosynthetic microorganisms to elevated mercury concentrations in deep-sea hydrothermal vents”, Limnology and Oceanography, vol. 54, pp. 41–49, 2009.
, “Another league under the sea: tomorrow's research subs open earth's final frontier”, Popular Science, vol. 274, 2009.
, “AUV design: shape, drag and practical issues”, Sea Technology, vol. 50, pp. 41–44, 2009.