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Thesis
H. F. Jensen, Variable buoyancy system metric, Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution, Cambridge, MA and Woods Hole, MA, 2009.
M. V. Jakuba, Stochastic mapping for chemical plume source localization with application to autonomous hydrothermal vent discovery, Massachusetts Institutte of Technology and Woods Hole Oceanographic Institution, Cambridge, Mass. and Woods Hole, Mass., 2007.
M. V. Jakuba, Modeling and control of an autonomous underwater vehicle with combined foil/thruster actuators, Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution, Cambridge, MA and Woods Hole, MA, 2003.
Journal Article
S. G. John, Rouxel, O. J., Craddock, P. R., Engwall, A. M., and Boyle, E. A., Zinc stable isotopes in seafloor hydrothermal vent fluids and chimneys, Earth and Planetary Science Letters, vol. 269, pp. 17–28, 2008.
J. Jungclaus, Barton, R. J., and Encarnacao, L. M., A web-based distributive aimulator for the Alvin deep submersible vehicle, Computer Graphics Topics, vol. 13, pp. 21–22, 2001.
P. Fryer, Gill, G. B., and Jackson, M. C., Volcanologic and tectonic evolution of the Kasuga seamounts, northern Mariana Trough: Alvin submersible investigations, Journal of Volcanology and Geothermal Research, vol. 79, pp. 277–311, 1997.
C. G. Wheat, Jannasch, H. W., Kastner, M., Plant, J. N., DeCarlo, E. H., and Lebon, G., Venting formation fluids from deep sea boreholes in a ridge flank setting: ODP Sites 1025 and 1026, Geochemistry, Geophysics, Geosystems, vol. 5, p. Article no. Q08007, 2004.
M. A. Tivey and Johnson, H. P., Variations in oceanic crustal structure and the implications for the fine-scale magnetic anomaly signal, Geophysical Research Letters, vol. 20, pp. 1879–1882, 1993.
C. R. Fisher, Childress, J. J., Arp, A. J., Brooks, J. M., Distel, D. L., Dugan, J. A., Felbeck, H., Fritz, L. W., Hessler, R. R., Johnson, K. S., Kennicutt, M. C., Lutz, R. A., Macko, S. A., Newton, A., Powell, M. A., Somero, G. N., and Soto, T., Variation in the hydrothermal vent clam, Calyptogena magnifica, at Rose Garden vent on the Galapagos Spreading center, Deep-Sea Research. Part A, Oceanographic Research Papers, vol. 35, pp. 1811–1832, 1988.
R. N. Peterson, Viso, R. F., MacDonald, I. R., and Joye, S. B., On the utility of radium isotopes as tracers of hydrocarbon discharge, Marine Chemistry, vol. 156, pp. 98–107, 2013.
M. L. Holmes and Johnson, H. P., Upper crustal densities derived from sea floor gravity measurements: Northern Juan De Fuca Ridge, Geophysical Research Letters, vol. 20, pp. 1871–1874, 1993.
H. Johnson and Tunnicliffe, V., Time-series measurements of hydrothermal activity on northern Juan De Fuca Ridge, Geophysical Research Letters, vol. 12, pp. 685–688, 1985.
C. Johansen, Todd, A. C., and MacDonald, I. R., Time series video analysis of bubble release processes at natural hydrocarbon seeps in the Northern Gulf of Mexico, Marine and Petroleum Geology, vol. 82, pp. 21–34, 2017.
D. Feng, Birgel, D., Peckmann, J., Roberts, H. H., Joye, S. B., Sassen, R., Liu, X. - L., Hinrichs, K. - U., and Chen, D., Time integrated variation of sources of fluids and seepage dynamics archived in authigenic carbonates from Gulf of Mexico Gas Hydrate Seafloor Observatory, Chemical Geology, vol. 385, pp. 129–139, 2014.
S. M. Maher, Gee, J. S., Cheadle, M. J., and John, B. E., Three-dimensional magnetic stripes require slow cooling in fast-spread lower ocean crust, Nature, vol. 597, pp. 511-515, 2021.
H. W. Jannasch, Wirsen, C. O., Nelson, D. C., and Robertson, L. A., Thiomicrospira crunogena sp. nov., a colorless sulfur-oxidizing bacterium from a deep-sea hydrothermal vent, International Journal of Systematic Bacteriology, vol. 35, pp. 422–424, 1985.
M. A. Tivey, Johnson, P. H., Bradley, A., and Yoerger, D. R., Thickness of a submarine lava flow determined from near-bottom magnetic field mapping by autonomous underwater vehicle, Geophysical Research Letters, vol. 25, pp. 805–808, 1998.
P. Chevaldonne, Fisher, C. R., Childress, J. J., Desbruyeres, D., Jollivet, D., Zal, F., and Toulmond, A., Thermotolerance and the ‘Pompeii worms', Marine Ecology Progress Series, vol. 208, pp. 293–295, 2000.
B. B. Jorgensen, Zawacki, L. X., and Jannasch, H. W., Thermophilic bacterial sulfate reduction in deep-sea sediments at the Guaymas Basin hydrothermal vent site (Gulf of California), Deep-Sea Research. Part A, Oceanographic Research Papers, vol. 37, pp. 695–710, 1990.
B. B. Jorgensen, Zawacki, L. X., and Jannasch, H. W., Thermophilic bacterial sulfate reduction in deep-sea sediments at the Guaymas Basin hydrothermal vent site (Gulf of California), Deep-Sea Research. Part A, Oceanographic Research Papers, vol. 37, pp. 695–710, 1990.
A. Neuner, Jannasch, H. W., Belkin, S., and Stetter, K. O., Thermococcus litoralis sp. nov.: a novel species of extremely thermophilic marine archaebacteria, Archives of Microbiology, vol. 153, pp. 205–207, 1990.
D. M. Karl, Burns, D., Orrett, K., and Jannasch, H. W., Themophilic microbial activity in samples from deep sea hydrothermal vents, Marine Biology Letters, vol. 5, pp. 227–231, 1984.
H. L. Hunt, Metaxas, A., Jennings, R. L., Halanych, K. M., and Mullineaux, L. S., Testing biological control of colonization by vestimentiferan tubeworms at deep-sea hydrothermal vents (East Pacific Rise, 9 degrees 50'N), Deep-Sea Research. Part I: Oceanographic Research Papers, vol. 51, pp. 225–234, 2004.
R. W. Lee, Robert, K., Matabos, M., Bates, A. E., and Juniper, S. K., Temporal and spatial variation in temperature experienced by macrofauna at Main Endeavour hydrothermal vent field, Deep-Sea Research Part I: Oceanographic Research Papers, vol. 106, pp. 154–166, 2015.

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